8th - 9th June, 2015
0900 - 1700
Computer Cluster 515, West Medical Building, University of Glasgow
Dave Clements, Johns Hopkins University, MD, USA
Galaxy is an open, web-based platform for data intensive biological research that enables researchers to create, run, tune, and share their own bioinformatic analyses. The workshop will teach attendees the basics of Galaxy, introducing the Galaxy interface and functionallity including a worked example. It will also detail RNA-Seq, ChIP-Seq, Genome Assembly and Variant Calling. At the end of the course, attendees will be able to install their own Galaxy server on a cloud infrastructure. The schedule can be seen at the bottom of this page.
A refund will be issued if a booking is cancelled more than one week prior to the workshop.
Tea and coffee will be provided, but please note that lunch is not provided.
These workshops are intended for researchers (graduate students, post-docs, and PI's) who want to analyse their own NGS raw data using the Galaxy server.
Amy Cattanach, Glasgow Polyomics
Registration and enquiries
To register, please contact us via our enquiry form.
Day 1 Workshop - Monday, 8th June 2015
0900 - 0930 Introduction
0930 - 1045 Basic Analysis
1045 - 1115 Coffee
1115 - 1200 Basic Analysis cont'd
1200 - 1230 Basic Analysis into Reusable Workflows
1230 - 1330 Lunch
1330 - 1530 ChIP-Seq Analysis
1530 - 1600 Coffee
1600 - 1630 Genome Assembly Concepts
1630 - 1700 Q and A session
Day 2 Workshop - Tuesday, 9th June 2015
0900 - 0930 Overview
0930 - 1030 RNA-Seq Analysis
1030 - 1045 Coffee
1045 - 1200 RNA-Seq Analysis cont'd
1200 - 1300 Lunch
1300 - 1430 RNA-Seq Analysis cont'd
1430 - 1530 SNP and Variant Calling
1530 - 1545 Coffee
1545 - 1615 Sharing, Publishing, and Reproducibility
1615 - 1700 Setting up your own Galaxy Cluster